Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyltransferase c-terminal domain-containing protein | AMR72_RS01355 | Not Available | Negative | 296415 - 298112 | 63536.3 |
| deoxyribodipyrimidine photo-lyase | AMR72_RS01360 | Not Available | Negative | 298177 - 299460 | 50407.8 |
| srpbcc family protein | AMR72_RS01365 | Not Available | Negative | 299469 - 299930 | 17690.7 |
| duf2911 domain-containing protein | AMR72_RS01370 | Not Available | Positive | 300083 - 300934 | 31426.5 |
| sodium:solute symporter | AMR72_RS01375 | Not Available | Negative | 301003 - 302712 | 64067.1 |
| pig-l family deacetylase | AMR72_RS01380 | Not Available | Negative | 302871 - 305357 | 92689.9 |
| mechanosensitive ion channel family protein | AMR72_RS01385 | Not Available | Negative | 305364 - 305888 | 19974.8 |
| maf-like protein | AMR72_RS01390 | Not Available | Negative | 305892 - 306485 | 22191.3 |
| hypothetical protein | AMR72_RS01395 | Not Available | Negative | 306478 - 307371 | 32358.3 |
| had family hydrolase | AMR72_RS01400 | Not Available | Negative | 307420 - 307947 | 19617.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
