Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heparinase ii/iii family protein | AMR72_RS13885 | Not Available | Positive | 3156605 - 3158377 | 69736.9 |
| glycosyltransferase family 4 protein | AMR72_RS13890 | Not Available | Positive | 3158374 - 3159447 | 41249.1 |
| o-antigen polymerase | AMR72_RS13895 | Not Available | Positive | 3159450 - 3160772 | 50557.9 |
| glycosyltransferase family 4 protein | AMR72_RS13900 | Not Available | Positive | 3160769 - 3161926 | 44824.3 |
| serine o-acetyltransferase | AMR72_RS13905 | Not Available | Positive | 3161908 - 3162363 | 16832.4 |
| alginate lyase family protein | AMR72_RS13910 | Not Available | Positive | 3162444 - 3164288 | 72383.0 |
| glycosyltransferase family 4 protein | AMR72_RS13915 | Not Available | Positive | 3164293 - 3165525 | 46931.6 |
| sugar transferase | AMR72_RS13920 | Not Available | Positive | 3165532 - 3166134 | 22810.0 |
| acetyltransferase | AMR72_RS13925 | Not Available | Positive | 3166136 - 3166741 | 20840.1 |
| degt/dnrj/eryc1/strs aminotransferase family protein | AMR72_RS13930 | Not Available | Positive | 3166828 - 3167970 | 41917.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
