Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide sugar dehydrogenase | AMR72_RS13835 | Not Available | Positive | 3146021 - 3147292 | 46445.9 |
| udp-glucose 6-dehydrogenase | AMR72_RS13840 | Not Available | Positive | 3147436 - 3148830 | 50964.6 |
| dtdp-glucose 4,6-dehydratase | AMR72_RS13845 | Not Available | Positive | 3148843 - 3149898 | 39828.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | AMR72_RS13850 | Not Available | Positive | 3149898 - 3150446 | 20608.4 |
| dtdp-4-dehydrorhamnose reductase | AMR72_RS13855 | Not Available | Positive | 3150453 - 3151313 | 31876.1 |
| glucose-1-phosphate thymidylyltransferase rfba | AMR72_RS13860 | Not Available | Positive | 3151310 - 3152176 | 31969.6 |
| hypothetical protein | AMR72_RS13865 | Not Available | Positive | 3152291 - 3152800 | 19103.1 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | AMR72_RS13870 | Not Available | Positive | 3152816 - 3153946 | 41848.3 |
| udp-n-acetyl-d-mannosamine dehydrogenase | AMR72_RS13875 | Not Available | Positive | 3153967 - 3155175 | 44520.8 |
| oligosaccharide flippase family protein | AMR72_RS13880 | Not Available | Positive | 3155188 - 3156603 | 54062.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
