Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l15 | AMR72_RS13685 | Not Available | Positive | 3116534 - 3116986 | 16058.3 |
| preprotein translocase subunit secy | AMR72_RS13690 | Not Available | Positive | 3117001 - 3118344 | 49101.1 |
| translation initiation factor if-1 | AMR72_RS13695 | Not Available | Positive | 3118353 - 3118568 | 8109.01 |
| type b 50s ribosomal protein l36 | AMR72_RS13700 | Not Available | Positive | 3118579 - 3118695 | 4543.8 |
| 30s ribosomal protein s13 | AMR72_RS13705 | Not Available | Positive | 3118698 - 3119072 | 13979.1 |
| 30s ribosomal protein s11 | AMR72_RS13710 | Not Available | Positive | 3119081 - 3119464 | 13700.7 |
| 30s ribosomal protein s4 | AMR72_RS13715 | Not Available | Positive | 3119550 - 3120155 | 22855.5 |
| dna-directed rna polymerase subunit alpha | AMR72_RS13720 | Not Available | Positive | 3120177 - 3121169 | 37506.9 |
| 50s ribosomal protein l17 | AMR72_RS13725 | Not Available | Positive | 3121202 - 3121714 | 19198.1 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | AMR72_RS13730 | Not Available | Positive | 3121886 - 3122995 | 40786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
