Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | AMR72_RS13535 | Not Available | Negative | 3091230 - 3091964 | 26473.2 |
| fibronectin type iii domain-containing protein | AMR72_RS13540 | Not Available | Positive | 3092160 - 3094898 | 101752.0 |
| t9ss type a sorting domain-containing protein | AMR72_RS13545 | Not Available | Negative | 3095010 - 3096668 | 59513.7 |
| hypothetical protein | AMR72_RS13550 | Not Available | Negative | 3096737 - 3097663 | 32242.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | AMR72_RS13555 | Not Available | Negative | 3097675 - 3099393 | 63324.5 |
| susc/raga family tonb-linked outer membrane protein | AMR72_RS13560 | Not Available | Negative | 3099404 - 3102553 | 114704.0 |
| hypothetical protein | AMR72_RS13565 | Not Available | Negative | 3102670 - 3104334 | 63285.9 |
| 30s ribosomal protein s12 | AMR72_RS13570 | Not Available | Positive | 3104514 - 3104894 | 13948.0 |
| 30s ribosomal protein s7 | AMR72_RS13575 | Not Available | Positive | 3104921 - 3105397 | 18427.6 |
| elongation factor g | AMR72_RS13580 | Not Available | Positive | 3105417 - 3107540 | 78138.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
