Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | AMR72_RS13485 | Not Available | Negative | 3082834 - 3083841 | 36864.2 |
| cytochrome c oxidase assembly factor coa1 family protein | AMR72_RS13490 | Not Available | Positive | 3083990 - 3084421 | 15907.3 |
| hypothetical protein | AMR72_RS13495 | Not Available | Positive | 3084593 - 3084976 | 15074.8 |
| abc transporter atp-binding protein | AMR72_RS13500 | Not Available | Positive | 3085041 - 3085670 | 22881.6 |
| ftsx-like permease family protein | AMR72_RS13505 | Not Available | Positive | 3085667 - 3087001 | 49243.0 |
| hypothetical protein | AMR72_RS13510 | Not Available | Positive | 3086994 - 3087488 | 18338.4 |
| yjjg family noncanonical pyrimidine nucleotidase | AMR72_RS13515 | Not Available | Positive | 3087488 - 3088177 | 26152.1 |
| hypothetical protein | AMR72_RS13520 | Not Available | Positive | 3088210 - 3088914 | 26542.5 |
| replication-associated recombination protein a | AMR72_RS13525 | Not Available | Negative | 3088980 - 3090254 | 47274.6 |
| rhomboid family intramembrane serine protease | AMR72_RS13530 | Not Available | Positive | 3090417 - 3091226 | 31206.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
