Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS01305 | Not Available | Negative | 289104 - 289817 | 27049.2 |
| helix-turn-helix transcriptional regulator | AMR72_RS01310 | Not Available | Negative | 289810 - 290715 | 35332.8 |
| duf983 domain-containing protein | AMR72_RS01315 | Not Available | Positive | 290807 - 291166 | 13627.0 |
| sialidase family protein | AMR72_RS01320 | Not Available | Positive | 291424 - 292473 | 38391.6 |
| hypothetical protein | AMR72_RS01325 | Not Available | Negative | 292662 - 293099 | 17032.9 |
| hypothetical protein | AMR72_RS01330 | Not Available | Negative | 293104 - 293511 | 15264.1 |
| rna polymerase sigma factor | AMR72_RS01335 | Not Available | Negative | 293542 - 294084 | 20831.7 |
| had family phosphatase | AMR72_RS01340 | Not Available | Positive | 294258 - 294914 | 24681.3 |
| had family phosphatase | AMR72_RS01345 | Not Available | Positive | 294960 - 295616 | 24464.2 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | AMR72_RS01350 | Not Available | Positive | 295717 - 296406 | 26187.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
