Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMR72_RS13285 | Not Available | Negative | 3036813 - 3037610 | 29919.7 |
| abc transporter permease | AMR72_RS13290 | Not Available | Negative | 3037610 - 3038350 | 27131.1 |
| glycosyltransferase family 2 protein | AMR72_RS13295 | Not Available | Negative | 3038434 - 3039282 | 32023.0 |
| glycosyltransferase family 2 protein | AMR72_RS13300 | Not Available | Positive | 3039342 - 3040211 | 32390.0 |
| lipopolysaccharide biosynthesis protein | AMR72_RS13305 | Not Available | Positive | 3040212 - 3041678 | 55390.4 |
| 3-oxoacyl-acp synthase iii family protein | AMR72_RS13310 | Not Available | Negative | 3041830 - 3042888 | 39283.1 |
| group iii truncated hemoglobin | AMR72_RS13315 | Not Available | Negative | 3043019 - 3043390 | 14338.2 |
| aminomethyl-transferring glycine dehydrogenase | AMR72_RS13320 | Not Available | Negative | 3043532 - 3046381 | 103767.0 |
| hypothetical protein | AMR72_RS13325 | Not Available | Positive | 3046514 - 3047338 | 31492.8 |
| tonb-dependent receptor domain-containing protein | AMR72_RS13330 | Not Available | Negative | 3047390 - 3050032 | 98119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
