Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | AMR72_RS13085 | Not Available | Positive | 2988213 - 2989439 | 44412.3 |
| folylpolyglutamate synthase/dihydrofolate synthase family protein | AMR72_RS13090 | Not Available | Positive | 2989505 - 2990719 | 44563.2 |
| Trna-val | Not Available | Not Available | Positive | 2990938 - 2991012 | Not Available |
| retropepsin-like aspartic protease | AMR72_RS13100 | Not Available | Negative | 2991111 - 2992457 | 50335.9 |
| tetr/acrr family transcriptional regulator | AMR72_RS13105 | Not Available | Positive | 2992664 - 2993245 | 21980.7 |
| mfs transporter | AMR72_RS13110 | Not Available | Positive | 2993320 - 2994519 | 44105.3 |
| nuclear transport factor 2 family protein | AMR72_RS13115 | Not Available | Negative | 2994643 - 2995044 | 15270.2 |
| nuclear transport factor 2 family protein | AMR72_RS13120 | Not Available | Negative | 2995811 - 2996275 | 17502.1 |
| helix-turn-helix domain-containing protein | AMR72_RS13125 | Not Available | Negative | 2996364 - 2997407 | 40422.6 |
| cpbp family intramembrane glutamic endopeptidase | AMR72_RS13130 | Not Available | Negative | 2997682 - 2998542 | 31163.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
