Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | AMR72_RS13035 | Not Available | Positive | 2976823 - 2978175 | 50191.0 |
| atp-binding protein | AMR72_RS13040 | Not Available | Negative | 2978172 - 2980604 | 92024.0 |
| helix-turn-helix domain-containing protein | AMR72_RS13045 | Not Available | Negative | 2980675 - 2981016 | 13282.1 |
| hypothetical protein | AMR72_RS13050 | Not Available | Positive | 2981378 - 2981713 | 12995.8 |
| acyl-coa dehydrogenase | AMR72_RS13055 | Not Available | Negative | 2981747 - 2982889 | 41654.0 |
| anhydro-n-acetylmuramic acid kinase | AMR72_RS13060 | Not Available | Positive | 2982981 - 2984048 | 38960.7 |
| response regulator | AMR72_RS13065 | Not Available | Negative | 2984045 - 2984722 | 25479.1 |
| lyttr family dna-binding domain-containing protein | AMR72_RS13070 | Not Available | Positive | 2984828 - 2985553 | 27810.2 |
| hypothetical protein | AMR72_RS13075 | Not Available | Negative | 2985759 - 2986055 | 10982.8 |
| atp-binding protein | AMR72_RS13080 | Not Available | Positive | 2986099 - 2988144 | 78052.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
