Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | AMR72_RS01255 | Not Available | Negative | 278290 - 279537 | 46818.1 |
| ph domain-containing protein | AMR72_RS01260 | Not Available | Negative | 279607 - 279981 | 14067.2 |
| yifb family mg chelatase-like aaa atpase | AMR72_RS01265 | Not Available | Positive | 280149 - 281684 | 56476.9 |
| hypothetical protein | AMR72_RS01270 | Not Available | Positive | 281716 - 281943 | 8907.59 |
| neutral zinc metallopeptidase | AMR72_RS01275 | Not Available | Negative | 281945 - 282796 | 31208.6 |
| duf5723 family protein | AMR72_RS01280 | Not Available | Negative | 282919 - 284277 | 48466.5 |
| rlua family pseudouridine synthase | AMR72_RS01285 | Not Available | Negative | 284473 - 285162 | 25983.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | AMR72_RS01290 | Not Available | Negative | 285184 - 286002 | 29711.2 |
| l-serine ammonia-lyase | AMR72_RS01295 | Not Available | Negative | 286195 - 287622 | 52112.9 |
| rsmb/nop family class i sam-dependent rna methyltransferase | AMR72_RS01300 | Not Available | Negative | 287814 - 289031 | 46828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
