Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | AMR72_RS12580 | Not Available | Negative | 2882976 - 2884166 | 43228.8 |
| acyl-coa desaturase | AMR72_RS12585 | Not Available | Negative | 2884200 - 2885294 | 42237.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | AMR72_RS12590 | Not Available | Positive | 2885405 - 2886034 | 23857.0 |
| l-glutamate gamma-semialdehyde dehydrogenase | AMR72_RS12595 | Not Available | Negative | 2886128 - 2887753 | 58934.1 |
| co2+/mg2+ efflux protein apag | AMR72_RS12600 | Not Available | Negative | 2887865 - 2888251 | 14558.4 |
| duf5103 domain-containing protein | AMR72_RS12605 | Not Available | Negative | 2888365 - 2889621 | 48867.5 |
| class i sam-dependent methyltransferase | AMR72_RS12610 | Not Available | Negative | 2889760 - 2890527 | 29912.9 |
| gxxexxy protein | AMR72_RS12615 | Not Available | Negative | 2890580 - 2890972 | 14900.3 |
| type i methionyl aminopeptidase | AMR72_RS12620 | Not Available | Negative | 2891024 - 2891842 | 30068.3 |
| acetyl-coa hydrolase/transferase family protein | AMR72_RS12625 | Not Available | Positive | 2891969 - 2893243 | 45945.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
