Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | AMR72_RS12530 | Not Available | Positive | 2873248 - 2873697 | 17076.9 |
| hypothetical protein | AMR72_RS12535 | Not Available | Negative | 2873698 - 2873880 | 6654.17 |
| acp s-malonyltransferase | AMR72_RS12540 | Not Available | Negative | 2874091 - 2874975 | 31017.6 |
| hypothetical protein | AMR72_RS12545 | Not Available | Positive | 2875346 - 2875627 | 11138.0 |
| bestrophin family protein | AMR72_RS12550 | Not Available | Negative | 2875683 - 2876633 | 36724.2 |
| hypothetical protein | AMR72_RS12555 | Not Available | Negative | 2876671 - 2877390 | 26812.4 |
| hamp domain-containing sensor histidine kinase | AMR72_RS12560 | Not Available | Negative | 2877471 - 2878868 | 53514.8 |
| response regulator transcription factor | AMR72_RS12565 | Not Available | Negative | 2878870 - 2879544 | 25194.8 |
| hypothetical protein | AMR72_RS12570 | Not Available | Positive | 2879780 - 2881414 | 60632.7 |
| formate-dependent phosphoribosylglycinamide formyltransferase | AMR72_RS12575 | Not Available | Negative | 2881566 - 2882732 | 41977.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
