Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | AMR72_RS12480 | Not Available | Positive | 2862192 - 2863247 | 40083.9 |
| phosphatase pap2 family protein | AMR72_RS12485 | Not Available | Positive | 2863755 - 2864459 | 25939.3 |
| npp1 family protein | AMR72_RS12490 | Not Available | Positive | 2864723 - 2865649 | 33848.2 |
| hypothetical protein | AMR72_RS12495 | Not Available | Negative | 2865801 - 2866010 | 7133.3 |
| s46 family peptidase | AMR72_RS12500 | Not Available | Negative | 2866242 - 2868377 | 80230.9 |
| crp/fnr family transcriptional regulator | AMR72_RS12505 | Not Available | Positive | 2868471 - 2869043 | 22291.1 |
| carboxymuconolactone decarboxylase family protein | AMR72_RS12510 | Not Available | Positive | 2869146 - 2869580 | 16403.9 |
| udp-glucose 4-epimerase gale | AMR72_RS12515 | Not Available | Negative | 2869680 - 2870693 | 36919.1 |
| degt/dnrj/eryc1/strs aminotransferase family protein | AMR72_RS12520 | Not Available | Negative | 2870787 - 2871917 | 41412.4 |
| 3-deoxy-d-manno-octulosonic acid transferase | AMR72_RS12525 | Not Available | Positive | 2872019 - 2873248 | 46207.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
