Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss type b sorting domain-containing protein | AMR72_RS12430 | Not Available | Negative | 2850331 - 2852442 | 74858.2 |
| rna methyltransferase | AMR72_RS12435 | Not Available | Negative | 2852468 - 2853007 | 19882.8 |
| dna mismatch repair protein muts | AMR72_RS12440 | Not Available | Positive | 2853241 - 2855847 | 97540.4 |
| hd family hydrolase | AMR72_RS12445 | Not Available | Positive | 2855923 - 2856513 | 22874.3 |
| Trna-gly | Not Available | Not Available | Positive | 2856778 - 2856853 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2856866 - 2856954 | Not Available |
| hypothetical protein | AMR72_RS12460 | Not Available | Positive | 2857035 - 2857364 | 12650.9 |
| duf6377 domain-containing protein | AMR72_RS12465 | Not Available | Positive | 2857443 - 2859080 | 62811.4 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | AMR72_RS12470 | Not Available | Positive | 2859251 - 2861467 | 81257.0 |
| duf1349 domain-containing protein | AMR72_RS12475 | Not Available | Positive | 2861538 - 2862188 | 25053.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
