Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMR72_RS12330 | Not Available | Positive | 2825988 - 2826761 | 29129.6 |
| hypothetical protein | AMR72_RS12335 | Not Available | Negative | 2826958 - 2828526 | 60081.5 |
| ompp1/fadl family transporter | AMR72_RS12340 | Not Available | Positive | 2828906 - 2830186 | 46872.7 |
| sgnh/gdsl hydrolase family protein | AMR72_RS12345 | Not Available | Positive | 2830199 - 2831698 | 52066.4 |
| phage holin family protein | AMR72_RS12350 | Not Available | Positive | 2831773 - 2832114 | 12480.1 |
| trigger factor | AMR72_RS12355 | Not Available | Positive | 2832240 - 2833565 | 49956.2 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | AMR72_RS12360 | Not Available | Positive | 2833658 - 2834332 | 25150.5 |
| atp-dependent clp protease atp-binding subunit clpx | AMR72_RS12365 | Not Available | Positive | 2834405 - 2835637 | 45666.3 |
| glycoside hydrolase family 97 protein | AMR72_RS12370 | Not Available | Positive | 2836083 - 2838179 | 78411.7 |
| hypothetical protein | AMR72_RS12375 | Not Available | Negative | 2838449 - 2838814 | 13877.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
