Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | AMR72_RS12280 | Not Available | Positive | 2816249 - 2816773 | 18759.4 |
| glutamate racemase | AMR72_RS12285 | Not Available | Negative | 2816770 - 2817552 | 29146.1 |
| omph family outer membrane protein | AMR72_RS12290 | Not Available | Negative | 2817615 - 2818124 | 18665.6 |
| omph family outer membrane protein | AMR72_RS12295 | Not Available | Negative | 2818177 - 2819292 | 42544.2 |
| outer membrane protein assembly factor bama | AMR72_RS12300 | Not Available | Negative | 2819330 - 2822029 | 100996.0 |
| isoprenyl transferase | AMR72_RS12305 | Not Available | Negative | 2822037 - 2822777 | 28259.1 |
| duf6089 family protein | AMR72_RS12310 | Not Available | Negative | 2822782 - 2823459 | 25384.6 |
| nad kinase | AMR72_RS12315 | Not Available | Negative | 2823614 - 2824498 | 33102.9 |
| cbs domain-containing protein | AMR72_RS12320 | Not Available | Negative | 2824514 - 2825173 | 25231.8 |
| pyridoxine 5'-phosphate synthase | AMR72_RS12325 | Not Available | Positive | 2825273 - 2825986 | 26084.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
