Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS12230 | Not Available | Positive | 2796663 - 2797214 | 20516.4 |
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | AMR72_RS12235 | Not Available | Positive | 2797217 - 2798137 | 35469.0 |
| pseudouridine synthase | AMR72_RS12240 | Not Available | Positive | 2798166 - 2799185 | 37788.4 |
| nuclear transport factor 2 family protein | AMR72_RS12245 | Not Available | Positive | 2799187 - 2799549 | 14164.9 |
| hypothetical protein | AMR72_RS12250 | Not Available | Negative | 2799651 - 2800214 | 21667.2 |
| m3 family metallopeptidase | AMR72_RS12255 | Not Available | Negative | 2800357 - 2802516 | 81928.5 |
| asma-like c-terminal region-containing protein | AMR72_RS12260 | Not Available | Positive | 2802648 - 2805461 | 104352.0 |
| nifu family protein | AMR72_RS12265 | Not Available | Negative | 2805499 - 2806398 | 33854.1 |
| choice-of-anchor l domain-containing protein | AMR72_RS12270 | Not Available | Positive | 2806644 - 2814956 | 294758.0 |
| type ix secretion system membrane protein porp/sprf | AMR72_RS12275 | Not Available | Positive | 2815189 - 2816181 | 37677.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
