Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | AMR72_RS12130 | Not Available | Negative | 2770823 - 2771278 | 16715.3 |
| hypothetical protein | AMR72_RS12135 | Not Available | Negative | 2771509 - 2771877 | 13843.8 |
| hypothetical protein | AMR72_RS12140 | Not Available | Negative | 2771908 - 2772300 | 15271.4 |
| hypothetical protein | AMR72_RS12145 | Not Available | Negative | 2772478 - 2772945 | 17279.9 |
| alpha-amylase family glycosyl hydrolase | AMR72_RS12150 | Not Available | Negative | 2773087 - 2775948 | 105773.0 |
| suse domain-containing protein | AMR72_RS12155 | Not Available | Negative | 2776006 - 2777088 | 38551.6 |
| ragb/susd family nutrient uptake outer membrane protein | AMR72_RS12160 | Not Available | Negative | 2777111 - 2778709 | 58589.4 |
| tonb-dependent receptor | AMR72_RS12165 | Not Available | Negative | 2778723 - 2781686 | 108898.0 |
| laci family dna-binding transcriptional regulator | AMR72_RS12170 | Not Available | Positive | 2781913 - 2782944 | 38508.4 |
| mfs transporter | AMR72_RS12175 | Not Available | Positive | 2783147 - 2784733 | 58438.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
