Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | AMR72_RS11880 | Not Available | Negative | 2718541 - 2720310 | 64315.9 |
| hypothetical protein | AMR72_RS11885 | Not Available | Negative | 2720412 - 2720891 | 17846.8 |
| nucleoside deaminase | AMR72_RS11890 | Not Available | Positive | 2720994 - 2721437 | 16428.9 |
| alpha-2-macroglobulin | AMR72_RS11895 | Not Available | Positive | 2721593 - 2727109 | 205168.0 |
| penicillin-binding protein 1c | AMR72_RS11900 | Not Available | Positive | 2727272 - 2729686 | 90714.2 |
| arac family transcriptional regulator | AMR72_RS11905 | Not Available | Negative | 2729764 - 2730660 | 34922.4 |
| sdr family nad(p)-dependent oxidoreductase | AMR72_RS11910 | Not Available | Negative | 2730736 - 2731554 | 29607.1 |
| hypothetical protein | AMR72_RS11915 | Not Available | Positive | 2731777 - 2732205 | 16287.1 |
| retropepsin-like aspartic protease | AMR72_RS11920 | Not Available | Negative | 2732210 - 2733079 | 31883.5 |
| hypothetical protein | AMR72_RS11925 | Not Available | Negative | 2733181 - 2733588 | 15155.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
