Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | AMR72_RS11630 | Not Available | Negative | 2665700 - 2666320 | 22959.3 |
| hypothetical protein | AMR72_RS11635 | Not Available | Positive | 2666422 - 2667876 | 55359.6 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | AMR72_RS11640 | Not Available | Positive | 2667883 - 2668611 | 26812.4 |
| hypothetical protein | AMR72_RS11645 | Not Available | Negative | 2668727 - 2668918 | 7261.55 |
| single-stranded-dna-specific exonuclease recj | AMR72_RS11650 | Not Available | Positive | 2669140 - 2670837 | 63008.9 |
| hypothetical protein | AMR72_RS11655 | Not Available | Positive | 2670934 - 2671287 | 13725.5 |
| udp-2,3-diacylglucosamine diphosphatase | AMR72_RS11660 | Not Available | Negative | 2671296 - 2672048 | 29500.3 |
| type ix secretion system membrane protein porp/sprf | AMR72_RS11665 | Not Available | Positive | 2672383 - 2673318 | 34674.1 |
| ompa family protein | AMR72_RS11670 | Not Available | Positive | 2673340 - 2675205 | 69421.3 |
| 6-carboxytetrahydropterin synthase | AMR72_RS11675 | Not Available | Negative | 2675462 - 2675914 | 17235.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
