Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family membrane protein | AMR72_RS11580 | Not Available | Negative | 2655999 - 2656376 | 13871.9 |
| hypothetical protein | AMR72_RS11585 | Not Available | Negative | 2656558 - 2657127 | 19653.6 |
| tonb-dependent receptor | AMR72_RS11590 | Not Available | Negative | 2657148 - 2659532 | 88896.8 |
| hypothetical protein | AMR72_RS11595 | Not Available | Negative | 2659758 - 2660102 | 13211.5 |
| tir domain-containing protein | AMR72_RS11600 | Not Available | Negative | 2660160 - 2661002 | 32673.0 |
| aspartate-semialdehyde dehydrogenase | AMR72_RS11605 | Not Available | Negative | 2661088 - 2662077 | 36198.5 |
| large conductance mechanosensitive channel protein mscl | AMR72_RS11610 | Not Available | Negative | 2662232 - 2662630 | 14202.8 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | AMR72_RS11615 | Not Available | Negative | 2662688 - 2665129 | 90959.1 |
| type ii toxin-antitoxin system rele/pare family toxin | AMR72_RS11620 | Not Available | Negative | 2665126 - 2665416 | 11424.0 |
| hypothetical protein | AMR72_RS11625 | Not Available | Negative | 2665413 - 2665658 | 9188.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
