Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | AMR72_RS01105 | Not Available | Positive | 248159 - 248521 | 13629.2 |
| succinate--coa ligase subunit alpha | AMR72_RS01110 | Not Available | Positive | 248636 - 249508 | 30030.4 |
| s41 family peptidase | AMR72_RS01115 | Not Available | Negative | 249557 - 250750 | 45018.9 |
| dna ligase d | AMR72_RS01120 | Not Available | Negative | 250791 - 253436 | 100409.0 |
| ku protein | AMR72_RS01125 | Not Available | Negative | 253442 - 254227 | 29883.7 |
| duf6766 family protein | AMR72_RS01130 | Not Available | Negative | 254328 - 254984 | 25205.2 |
| ferritin-like domain-containing protein | AMR72_RS01135 | Not Available | Negative | 255060 - 255590 | 19296.8 |
| dna-deoxyinosine glycosylase | AMR72_RS01140 | Not Available | Positive | 255909 - 256400 | 18795.5 |
| hypothetical protein | AMR72_RS01145 | Not Available | Positive | 256760 - 257233 | 18194.7 |
| hypothetical protein | AMR72_RS01150 | Not Available | Positive | 257443 - 257637 | 7374.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
