Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | AMR72_RS11430 | Not Available | Negative | 2624440 - 2625525 | 42484.3 |
| 2'-5' rna ligase family protein | AMR72_RS11435 | Not Available | Negative | 2625585 - 2626196 | 22932.7 |
| arac family transcriptional regulator | AMR72_RS11440 | Not Available | Positive | 2626578 - 2626970 | 14921.1 |
| putative dna modification/repair radical sam protein | AMR72_RS11445 | Not Available | Positive | 2627251 - 2628513 | 47853.8 |
| tigr03915 family putative dna repair protein | AMR72_RS11450 | Not Available | Positive | 2628605 - 2629381 | 30954.9 |
| asma-like c-terminal region-containing protein | AMR72_RS11455 | Not Available | Negative | 2629384 - 2631843 | 91709.7 |
| carboxypeptidase-like regulatory domain-containing protein | AMR72_RS11460 | Not Available | Negative | 2631995 - 2632816 | 29928.2 |
| hypothetical protein | AMR72_RS11465 | Not Available | Positive | 2632948 - 2633241 | 10714.5 |
| 2'-5' rna ligase family protein | AMR72_RS11470 | Not Available | Positive | 2633496 - 2634050 | 21606.9 |
| sdr family nad(p)-dependent oxidoreductase | AMR72_RS11475 | Not Available | Negative | 2634237 - 2634995 | 26553.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
