Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosome-binding factor rbfa | AMR72_RS11380 | Not Available | Negative | 2611928 - 2612320 | 14618.8 |
| methylmalonyl-coa epimerase | AMR72_RS11385 | Not Available | Negative | 2612489 - 2612893 | 14807.9 |
| Trna-met | Not Available | Not Available | Positive | 2613232 - 2613305 | Not Available |
| cold-shock protein | AMR72_RS11395 | Not Available | Positive | 2613629 - 2613823 | 6946.21 |
| dmt family transporter | AMR72_RS11400 | Not Available | Positive | 2614058 - 2614963 | 32923.4 |
| hypothetical protein | AMR72_RS11405 | Not Available | Negative | 2615015 - 2615596 | 21310.8 |
| pas domain-containing protein | AMR72_RS11410 | Not Available | Negative | 2615669 - 2618437 | 104628.0 |
| mfs transporter | AMR72_RS11415 | Not Available | Negative | 2618794 - 2619960 | 40852.7 |
| arac family transcriptional regulator | AMR72_RS11420 | Not Available | Positive | 2620057 - 2620887 | 32289.8 |
| nacht domain-containing ntpase | AMR72_RS11425 | Not Available | Negative | 2620899 - 2624438 | 140381.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
