Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMR72_RS11330 | Not Available | Negative | 2600872 - 2601351 | 18210.8 |
| response regulator | AMR72_RS11335 | Not Available | Negative | 2601408 - 2601830 | 16021.2 |
| hypothetical protein | AMR72_RS11340 | Not Available | Negative | 2602038 - 2602724 | 26140.0 |
| translation elongation factor 4 | AMR72_RS11345 | Not Available | Negative | 2602811 - 2604607 | 66690.7 |
| trna dihydrouridine synthase dusb | AMR72_RS11350 | Not Available | Positive | 2605703 - 2606689 | 36898.5 |
| hypothetical protein | AMR72_RS11355 | Not Available | Negative | 2606850 - 2607464 | 24017.4 |
| rna polymerase sigma factor | AMR72_RS11360 | Not Available | Negative | 2607454 - 2607957 | 19880.8 |
| trab/gumn family protein | AMR72_RS11365 | Not Available | Negative | 2607989 - 2608846 | 32103.6 |
| mate family efflux transporter | AMR72_RS11370 | Not Available | Negative | 2609020 - 2610444 | 51337.1 |
| ftsx-like permease family protein | AMR72_RS11375 | Not Available | Negative | 2610702 - 2611907 | 44245.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
