Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa synthase family protein | AMR72_RS11230 | Not Available | Negative | 2570583 - 2571944 | 50191.4 |
| chan family lipoprotein | AMR72_RS11235 | Not Available | Positive | 2572124 - 2572975 | 31795.0 |
| succinate dehydrogenase cytochrome b subunit | AMR72_RS11240 | Not Available | Positive | 2573193 - 2574023 | 30942.4 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | AMR72_RS11245 | Not Available | Positive | 2574039 - 2576045 | 73953.4 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | AMR72_RS11250 | Not Available | Positive | 2576058 - 2576819 | 27826.2 |
| triple tyrosine motif-containing protein | AMR72_RS11255 | Not Available | Negative | 2577004 - 2579922 | 111724.0 |
| tonb-dependent receptor | AMR72_RS11260 | Not Available | Positive | 2580311 - 2583244 | 107213.0 |
| ragb/susd family nutrient uptake outer membrane protein | AMR72_RS11265 | Not Available | Positive | 2583256 - 2584749 | 55498.1 |
| glycoside hydrolase family 30 beta sandwich domain-containing protein | AMR72_RS11270 | Not Available | Positive | 2584772 - 2586235 | 52637.9 |
| glycoside hydrolase family 30 beta sandwich domain-containing protein | AMR72_RS11275 | Not Available | Positive | 2586303 - 2587730 | 51795.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
