Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pfkb family carbohydrate kinase | AMR72_RS11180 | Not Available | Positive | 2553815 - 2554747 | 34354.4 |
| amidophosphoribosyltransferase | AMR72_RS11185 | Not Available | Positive | 2554818 - 2556716 | 71807.6 |
| superoxide dismutase | AMR72_RS11190 | Not Available | Negative | 2557301 - 2557909 | 22506.5 |
| exodeoxyribonuclease v subunit beta | AMR72_RS11195 | Not Available | Positive | 2558030 - 2561170 | 119570.0 |
| glycine c-acetyltransferase | AMR72_RS11200 | Not Available | Positive | 2561235 - 2562428 | 43573.5 |
| ompa family protein | AMR72_RS11205 | Not Available | Positive | 2562535 - 2563917 | 49844.9 |
| pd-(d/e)xk nuclease family protein | AMR72_RS11210 | Not Available | Positive | 2563984 - 2566758 | 106168.0 |
| alpha/beta fold hydrolase | AMR72_RS11215 | Not Available | Negative | 2566905 - 2567687 | 29632.9 |
| aminopeptidase p family protein | AMR72_RS11220 | Not Available | Negative | 2568044 - 2569336 | 49874.6 |
| fic family protein | AMR72_RS11225 | Not Available | Positive | 2569479 - 2570582 | 41852.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
