Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyth domain-containing protein | AMR72_RS11080 | Not Available | Positive | 2532227 - 2532700 | 17860.7 |
| ypda family putative bacillithiol disulfide reductase | AMR72_RS11085 | Not Available | Positive | 2532688 - 2533665 | 36501.6 |
| gbsr/marr family transcriptional regulator | AMR72_RS11090 | Not Available | Positive | 2533869 - 2534360 | 19040.2 |
| hypothetical protein | AMR72_RS11095 | Not Available | Positive | 2534405 - 2535469 | 38114.9 |
| efflux rnd transporter permease subunit | AMR72_RS11100 | Not Available | Positive | 2535572 - 2538748 | 114906.0 |
| efflux transporter outer membrane subunit | AMR72_RS11105 | Not Available | Positive | 2538765 - 2540186 | 52648.6 |
| hypothetical protein | AMR72_RS11110 | Not Available | Positive | 2540422 - 2540868 | 16799.2 |
| t9ss type b sorting domain-containing protein | AMR72_RS11115 | Not Available | Positive | 2541731 - 2544022 | 83430.4 |
| hypothetical protein | AMR72_RS11120 | Not Available | Positive | 2544211 - 2544645 | 16718.1 |
| pa0069 family radical sam protein | AMR72_RS11125 | Not Available | Positive | 2544844 - 2545899 | 39977.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
