Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | AMR72_RS10980 | Not Available | Positive | 2510630 - 2512831 | 81650.1 |
| amino acid permease | AMR72_RS10985 | Not Available | Positive | 2513013 - 2514647 | 58582.2 |
| hypothetical protein | AMR72_RS10990 | Not Available | Negative | 2514755 - 2514955 | 7826.61 |
| homogentisate 1,2-dioxygenase | AMR72_RS10995 | Not Available | Positive | 2514975 - 2516132 | 44487.0 |
| 4-hydroxyphenylpyruvate dioxygenase | AMR72_RS11000 | Not Available | Positive | 2516268 - 2517428 | 43633.9 |
| duf3108 domain-containing protein | AMR72_RS11005 | Not Available | Positive | 2517730 - 2518497 | 29397.1 |
| tryptophan 2,3-dioxygenase family protein | AMR72_RS11010 | Not Available | Positive | 2518500 - 2519432 | 37194.2 |
| peptidoglycan dd-metalloendopeptidase family protein | AMR72_RS11015 | Not Available | Positive | 2519456 - 2520694 | 46503.9 |
| glucose-6-phosphate isomerase | AMR72_RS11020 | Not Available | Positive | 2520707 - 2522347 | 60687.1 |
| acyl-coa desaturase | AMR72_RS11025 | Not Available | Positive | 2522791 - 2523876 | 41301.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
