Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine dehydrogenase | AMR72_RS01055 | Not Available | Negative | 238117 - 239316 | 43840.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | AMR72_RS01060 | Not Available | Negative | 239370 - 239777 | 15469.5 |
| bifunctional response regulator/alkaline phosphatase family protein | AMR72_RS01065 | Not Available | Negative | 239792 - 241348 | 60671.8 |
| hypothetical protein | AMR72_RS01070 | Not Available | Negative | 241554 - 241850 | 10994.0 |
| hd domain-containing protein | AMR72_RS01075 | Not Available | Positive | 242025 - 243269 | 47994.6 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | AMR72_RS01080 | Not Available | Positive | 243293 - 244321 | 36885.0 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | AMR72_RS01085 | Not Available | Positive | 244330 - 245718 | 50874.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | AMR72_RS01090 | Not Available | Positive | 245729 - 246517 | 28249.2 |
| elongation factor p | AMR72_RS01095 | Not Available | Positive | 246576 - 247142 | 21025.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | AMR72_RS01100 | Not Available | Positive | 247228 - 248157 | 33245.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
