Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS10930 | Not Available | Negative | 2498475 - 2498960 | 18393.8 |
| hypothetical protein | AMR72_RS10935 | Not Available | Negative | 2499092 - 2499622 | 19633.0 |
| hypothetical protein | AMR72_RS10940 | Not Available | Negative | 2499691 - 2500788 | 39700.7 |
| isoleucine--trna ligase | AMR72_RS10945 | Not Available | Positive | 2500994 - 2504425 | 129172.0 |
| trar/dksa c4-type zinc finger protein | AMR72_RS10950 | Not Available | Positive | 2504433 - 2504813 | 14443.3 |
| giy-yig nuclease family protein | AMR72_RS10955 | Not Available | Negative | 2505290 - 2505601 | 12495.7 |
| lipoprotein signal peptidase | AMR72_RS10960 | Not Available | Positive | 2506166 - 2506762 | 22392.7 |
| 5-formyltetrahydrofolate cyclo-ligase | AMR72_RS10965 | Not Available | Negative | 2506887 - 2507453 | 21761.1 |
| succinylglutamate desuccinylase/aspartoacylase family protein | AMR72_RS10970 | Not Available | Negative | 2507639 - 2508607 | 35737.4 |
| excinuclease abc subunit uvrc | AMR72_RS10975 | Not Available | Positive | 2508829 - 2510625 | 69053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
