Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-specific glutamate dehydrogenase | AMR72_RS10680 | Not Available | Negative | 2450390 - 2451733 | 48919.5 |
| cystathionine gamma-synthase | AMR72_RS10685 | Not Available | Negative | 2451926 - 2453071 | 41937.4 |
| duf3298 and duf4163 domain-containing protein | AMR72_RS10690 | Not Available | Positive | 2453267 - 2453974 | 26493.6 |
| two-component regulator propeller domain-containing protein | AMR72_RS10695 | Not Available | Positive | 2454339 - 2456630 | 83337.2 |
| dna repair protein reco | AMR72_RS10700 | Not Available | Positive | 2456670 - 2457383 | 27403.1 |
| hypothetical protein | AMR72_RS10705 | Not Available | Negative | 2457384 - 2458016 | 24242.3 |
| chap domain-containing protein | AMR72_RS10710 | Not Available | Negative | 2458016 - 2458480 | 16887.1 |
| phage holin family protein | AMR72_RS10715 | Not Available | Negative | 2458486 - 2458911 | 16180.3 |
| pyocin knob domain-containing protein | AMR72_RS10720 | Not Available | Negative | 2458931 - 2463244 | 151204.0 |
| hypothetical protein | AMR72_RS10725 | Not Available | Negative | 2463246 - 2463746 | 18837.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
