Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4258 domain-containing protein | AMR72_RS01005 | Not Available | Positive | 226991 - 227365 | 14234.6 |
| Trna-val | Not Available | Not Available | Positive | 227463 - 227537 | Not Available |
| serine hydrolase | AMR72_RS01015 | Not Available | Negative | 227603 - 229084 | 56503.2 |
| helix-turn-helix domain-containing protein | AMR72_RS01020 | Not Available | Negative | 229172 - 229747 | 21517.1 |
| hypothetical protein | AMR72_RS01025 | Not Available | Positive | 230286 - 230783 | 19363.0 |
| t9ss type b sorting domain-containing protein | AMR72_RS01030 | Not Available | Negative | 230838 - 233126 | 83314.4 |
| arac family transcriptional regulator | AMR72_RS01035 | Not Available | Negative | 233197 - 233979 | 30415.9 |
| rlua family pseudouridine synthase | AMR72_RS01040 | Not Available | Negative | 234171 - 235835 | 63868.8 |
| t9ss type a sorting domain-containing protein | AMR72_RS01045 | Not Available | Negative | 236000 - 236914 | 33997.4 |
| phosphotransferase enzyme family protein | AMR72_RS01050 | Not Available | Positive | 237084 - 238070 | 38758.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
