Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| suf system fe-s cluster assembly protein | AMR72_RS10430 | Not Available | Positive | 2385240 - 2385563 | 12141.7 |
| duf2480 family protein | AMR72_RS10435 | Not Available | Positive | 2385690 - 2386199 | 19567.5 |
| duf3078 domain-containing protein | AMR72_RS10440 | Not Available | Positive | 2386267 - 2387145 | 33339.2 |
| pyruvate oxidase | AMR72_RS10445 | Not Available | Positive | 2387280 - 2389016 | 62801.9 |
| gtpase hflx | AMR72_RS10450 | Not Available | Negative | 2389058 - 2390293 | 47658.1 |
| fibronectin type iii domain-containing protein | AMR72_RS10455 | Not Available | Positive | 2390456 - 2398858 | 300282.0 |
| type ix secretion system membrane protein porp/sprf | AMR72_RS10460 | Not Available | Positive | 2398960 - 2399895 | 34674.1 |
| ompa family protein | AMR72_RS10465 | Not Available | Positive | 2399917 - 2401782 | 69435.4 |
| tetr/acrr family transcriptional regulator | AMR72_RS10470 | Not Available | Positive | 2401934 - 2402527 | 22501.4 |
| mfs transporter | AMR72_RS10475 | Not Available | Positive | 2402567 - 2403841 | 46155.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
