Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--trna ligase | AMR72_RS10230 | Not Available | Negative | 2338098 - 2339606 | 57172.3 |
| duf4175 family protein | AMR72_RS10235 | Not Available | Positive | 2339808 - 2343137 | 127177.0 |
| rrna maturation rnase ybey | AMR72_RS10240 | Not Available | Positive | 2343130 - 2343549 | 16545.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | AMR72_RS10245 | Not Available | Positive | 2343701 - 2345572 | 69960.7 |
| hypothetical protein | AMR72_RS10250 | Not Available | Positive | 2345647 - 2346096 | 17430.7 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AMR72_RS10255 | Not Available | Positive | 2346096 - 2346950 | 32484.3 |
| omph family outer membrane protein | AMR72_RS10260 | Not Available | Positive | 2347191 - 2347781 | 22177.5 |
| helix-turn-helix domain-containing protein | AMR72_RS10265 | Not Available | Positive | 2347886 - 2350171 | 87339.7 |
| hypothetical protein | AMR72_RS10270 | Not Available | Negative | 2350254 - 2350637 | 14052.6 |
| dna polymerase iii subunit delta' | AMR72_RS10275 | Not Available | Negative | 2350642 - 2351790 | 43145.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
