Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | AMR72_RS10180 | Not Available | Positive | 2329499 - 2330179 | 25318.1 |
| Trna-cys | Not Available | Not Available | Positive | 2330235 - 2330305 | Not Available |
| lta synthase family protein | AMR72_RS10190 | Not Available | Positive | 2330453 - 2332405 | 73952.2 |
| dihydroneopterin aldolase | AMR72_RS10195 | Not Available | Negative | 2332421 - 2332777 | 13386.2 |
| glutamine--trna ligase/yqey domain fusion protein | AMR72_RS10200 | Not Available | Positive | 2333002 - 2334687 | 65259.8 |
| ytxh domain-containing protein | AMR72_RS10205 | Not Available | Positive | 2335213 - 2335548 | 11641.1 |
| phage holin family protein | AMR72_RS10210 | Not Available | Positive | 2335562 - 2335915 | 13659.4 |
| duf6327 family protein | AMR72_RS10215 | Not Available | Positive | 2335922 - 2336158 | 8877.98 |
| 3-ketoacyl-acp reductase | AMR72_RS10220 | Not Available | Negative | 2336196 - 2336918 | 25503.7 |
| spfh domain-containing protein | AMR72_RS10225 | Not Available | Negative | 2337017 - 2338015 | 37553.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
