Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase | AMR72_RS10080 | Not Available | Negative | 2307862 - 2309049 | 45227.4 |
| glycosyltransferase | AMR72_RS10085 | Not Available | Negative | 2309049 - 2309846 | 30337.9 |
| o-antigen ligase | AMR72_RS10090 | Not Available | Negative | 2309839 - 2311203 | 52254.7 |
| glycosyltransferase | AMR72_RS10095 | Not Available | Negative | 2311214 - 2312290 | 41910.5 |
| flippase | AMR72_RS10100 | Not Available | Negative | 2312283 - 2313575 | 49444.9 |
| hypothetical protein | AMR72_RS10105 | Not Available | Negative | 2313630 - 2314616 | 37880.6 |
| duf6909 family protein | AMR72_RS10110 | Not Available | Negative | 2314624 - 2316309 | 63077.9 |
| gh3 auxin-responsive promoter family protein | AMR72_RS10115 | Not Available | Negative | 2316408 - 2317889 | 55711.6 |
| hypothetical protein | AMR72_RS10120 | Not Available | Positive | 2317909 - 2318088 | 6647.01 |
| m23 family metallopeptidase | AMR72_RS10125 | Not Available | Negative | 2318254 - 2319123 | 32130.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
