Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMR72_RS00055 | Not Available | Positive | 7850 - 8638 | 30274.7 |
| hypothetical protein | AMR72_RS00060 | Not Available | Positive | 8643 - 9839 | 46647.3 |
| hypothetical protein | AMR72_RS00065 | Not Available | Positive | 9884 - 10756 | 33402.9 |
| hypothetical protein | AMR72_RS00070 | Not Available | Positive | 10759 - 11040 | 10506.9 |
| recombinase family protein | AMR72_RS00075 | Not Available | Positive | 11276 - 11605 | 13018.7 |
| recombinase family protein | AMR72_RS00080 | Not Available | Positive | 11629 - 12783 | 44391.6 |
| Trna-arg | Not Available | Not Available | Positive | 12781 - 12857 | Not Available |
| adenine phosphoribosyltransferase | AMR72_RS00090 | Not Available | Positive | 12971 - 13483 | 19060.3 |
| hypothetical protein | AMR72_RS00095 | Not Available | Negative | 13480 - 13620 | 5466.79 |
| m56 family metallopeptidase | AMR72_RS00100 | Not Available | Negative | 13700 - 15802 | 80179.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
