Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | AMR72_RS09880 | Not Available | Positive | 2269347 - 2271194 | 65737.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AMR72_RS09885 | Not Available | Negative | 2271250 - 2272002 | 29228.6 |
| tryptophan--trna ligase | AMR72_RS09890 | Not Available | Positive | 2272081 - 2273052 | 36034.1 |
| dna-processing protein dpra | AMR72_RS09895 | Not Available | Negative | 2273166 - 2274269 | 40955.0 |
| spor domain-containing protein | AMR72_RS09900 | Not Available | Positive | 2274369 - 2275307 | 35167.2 |
| acyl-coa thioesterase | AMR72_RS09905 | Not Available | Positive | 2275366 - 2275875 | 18628.5 |
| murein hydrolase activator envc | AMR72_RS09910 | Not Available | Negative | 2275914 - 2277167 | 47292.2 |
| duf4292 domain-containing protein | AMR72_RS09915 | Not Available | Negative | 2277185 - 2277964 | 29087.0 |
| lipopolysaccharide assembly protein lapb | AMR72_RS09920 | Not Available | Negative | 2277964 - 2279328 | 52832.9 |
| sugar phosphate nucleotidyltransferase | AMR72_RS09925 | Not Available | Negative | 2279335 - 2280345 | 36708.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
