Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | AMR72_RS09730 | Not Available | Positive | 2242605 - 2243276 | 24816.8 |
| uroporphyrinogen decarboxylase | AMR72_RS09735 | Not Available | Positive | 2243379 - 2244404 | 38221.6 |
| hypothetical protein | AMR72_RS09740 | Not Available | Positive | 2244470 - 2244823 | 13439.1 |
| gnat family n-acetyltransferase | AMR72_RS09745 | Not Available | Positive | 2244837 - 2245388 | 21074.0 |
| oxygen-dependent coproporphyrinogen oxidase | AMR72_RS09750 | Not Available | Positive | 2245378 - 2246280 | 34723.6 |
| duf4421 family protein | AMR72_RS09755 | Not Available | Positive | 2246271 - 2247221 | 34989.3 |
| is200/is605 family transposase | AMR72_RS09760 | Not Available | Positive | 2247242 - 2247700 | 17915.4 |
| porphobilinogen synthase | AMR72_RS09765 | Not Available | Positive | 2247943 - 2248938 | 36740.3 |
| c-type cytochrome | AMR72_RS09770 | Not Available | Positive | 2248997 - 2249401 | 15091.0 |
| response regulator transcription factor | AMR72_RS09775 | Not Available | Negative | 2249594 - 2250277 | 26237.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
