Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 208355 - 208687 | Not Available |
| duf3575 domain-containing protein | AMR72_RS00910 | Not Available | Negative | 208687 - 209232 | 20659.0 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | AMR72_RS00915 | Not Available | Negative | 209278 - 209862 | 22112.3 |
| duf3822 family protein | AMR72_RS00920 | Not Available | Negative | 209859 - 210662 | 31236.9 |
| atp-dependent recd-like dna helicase | AMR72_RS00925 | Not Available | Positive | 210771 - 212192 | 54344.7 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | AMR72_RS00930 | Not Available | Positive | 212215 - 212946 | 27448.1 |
| spermidine synthase | AMR72_RS00935 | Not Available | Negative | 213032 - 213694 | 25793.4 |
| phytanoyl-coa dioxygenase family protein | AMR72_RS00940 | Not Available | Negative | 213687 - 214418 | 27948.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AMR72_RS00945 | Not Available | Positive | 214480 - 215028 | 21405.2 |
| helix-turn-helix transcriptional regulator | AMR72_RS00950 | Not Available | Negative | 215237 - 215719 | 18022.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
