Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response dexh box helicase | AMR72_RS09430 | Not Available | Negative | 2181635 - 2184100 | 93556.2 |
| atp-dependent dna ligase | AMR72_RS09435 | Not Available | Negative | 2184178 - 2185782 | 61876.7 |
| ligase-associated dna damage response exonuclease | AMR72_RS09440 | Not Available | Negative | 2185779 - 2186819 | 38940.9 |
| hypothetical protein | AMR72_RS09445 | Not Available | Negative | 2186958 - 2187170 | 8344.96 |
| hypothetical protein | AMR72_RS09450 | Not Available | Positive | 2187314 - 2187796 | 17709.1 |
| hypothetical protein | AMR72_RS09455 | Not Available | Positive | 2187920 - 2188372 | 17704.1 |
| duf2075 domain-containing protein | AMR72_RS09460 | Not Available | Negative | 2188410 - 2190389 | 75418.8 |
| helix-turn-helix domain-containing protein | AMR72_RS09465 | Not Available | Negative | 2190382 - 2190588 | 7766.69 |
| hypothetical protein | AMR72_RS09470 | Not Available | Positive | 2190677 - 2190982 | 11898.9 |
| hypothetical protein | AMR72_RS09475 | Not Available | Negative | 2191046 - 2191351 | 11555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
