Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2174313 - 2174387 | Not Available |
| hypothetical protein | AMR72_RS09385 | Not Available | Positive | 2174471 - 2174971 | 19257.0 |
| hypothetical protein | AMR72_RS09390 | Not Available | Positive | 2175078 - 2175626 | 20203.4 |
| pepsy domain-containing protein | AMR72_RS09395 | Not Available | Negative | 2175919 - 2176284 | 12722.0 |
| crp/fnr family transcriptional regulator | AMR72_RS09400 | Not Available | Positive | 2176505 - 2177071 | 21351.7 |
| sdr family oxidoreductase | AMR72_RS09405 | Not Available | Positive | 2177151 - 2177876 | 26311.8 |
| hypothetical protein | AMR72_RS09410 | Not Available | Negative | 2177935 - 2178225 | 10866.7 |
| dinb family protein | AMR72_RS09415 | Not Available | Negative | 2178392 - 2178895 | 19257.3 |
| aldehyde dehydrogenase family protein | AMR72_RS09420 | Not Available | Positive | 2179128 - 2180762 | 60246.5 |
| ligase-associated dna damage response endonuclease pdem | AMR72_RS09425 | Not Available | Negative | 2180832 - 2181488 | 24849.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
