Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | AMR72_RS09230 | Not Available | Positive | 2139222 - 2140184 | 35860.1 |
| alpha/beta hydrolase | AMR72_RS09235 | Not Available | Positive | 2140227 - 2141372 | 43688.4 |
| dna repair protein rada | AMR72_RS09240 | Not Available | Positive | 2141549 - 2142910 | 49912.4 |
| transglycosylase domain-containing protein | AMR72_RS09245 | Not Available | Positive | 2142924 - 2144918 | 75742.4 |
| duf4139 domain-containing protein | AMR72_RS09250 | Not Available | Positive | 2144987 - 2146600 | 59979.7 |
| pqq-dependent sugar dehydrogenase | AMR72_RS09255 | Not Available | Positive | 2146675 - 2148027 | 48561.5 |
| t9ss type a sorting domain-containing protein | AMR72_RS09260 | Not Available | Positive | 2148262 - 2149125 | 31250.8 |
| ompa family protein | AMR72_RS09265 | Not Available | Negative | 2149204 - 2150166 | 35176.8 |
| exodeoxyribonuclease iii | AMR72_RS09270 | Not Available | Negative | 2150196 - 2150957 | 29491.9 |
| lysophospholipid acyltransferase family protein | AMR72_RS09275 | Not Available | Positive | 2151148 - 2152968 | 70110.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
