Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | AMR72_RS09080 | Not Available | Positive | 2098270 - 2098836 | 20871.1 |
| fmn-dependent nadh-azoreductase | AMR72_RS09085 | Not Available | Negative | 2098929 - 2099537 | 21691.7 |
| reprolysin-like metallopeptidase | AMR72_RS09090 | Not Available | Negative | 2099673 - 2102924 | 116410.0 |
| hypothetical protein | AMR72_RS09095 | Not Available | Positive | 2103046 - 2103549 | 18501.2 |
| bifunctional riboflavin kinase/fad synthetase | AMR72_RS09100 | Not Available | Positive | 2103668 - 2104603 | 35052.9 |
| httm domain-containing protein | AMR72_RS09105 | Not Available | Positive | 2104600 - 2105928 | 51494.6 |
| hypothetical protein | AMR72_RS09110 | Not Available | Positive | 2106114 - 2106587 | 17838.7 |
| tetratricopeptide repeat protein | AMR72_RS09115 | Not Available | Positive | 2106701 - 2108368 | 63840.4 |
| choice-of-anchor j domain-containing protein | AMR72_RS09120 | Not Available | Positive | 2108520 - 2114471 | 215305.0 |
| type ix secretion system membrane protein porp/sprf | AMR72_RS09125 | Not Available | Positive | 2114609 - 2115544 | 34646.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
