Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20 family metallo-hydrolase | AMR72_RS08980 | Not Available | Positive | 2065261 - 2066388 | 40985.9 |
| argininosuccinate lyase | AMR72_RS08985 | Not Available | Positive | 2066385 - 2067671 | 47587.4 |
| tolc family protein | AMR72_RS08990 | Not Available | Negative | 2067833 - 2069107 | 48695.9 |
| abc transporter permease | AMR72_RS08995 | Not Available | Negative | 2069228 - 2071651 | 91519.9 |
| abc transporter permease | AMR72_RS09000 | Not Available | Negative | 2071654 - 2074074 | 91624.8 |
| abc transporter permease | AMR72_RS09005 | Not Available | Negative | 2074077 - 2076512 | 91543.5 |
| abc transporter atp-binding protein | AMR72_RS09010 | Not Available | Negative | 2076660 - 2077370 | 25986.2 |
| hypothetical protein | AMR72_RS09015 | Not Available | Negative | 2077481 - 2077873 | 14571.3 |
| efflux rnd transporter periplasmic adaptor subunit | AMR72_RS09020 | Not Available | Negative | 2077915 - 2079159 | 47012.2 |
| sigma-54 dependent transcriptional regulator | AMR72_RS09025 | Not Available | Positive | 2079302 - 2080648 | 50577.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
