Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS08880 | Not Available | Negative | 2023646 - 2024125 | 17846.5 |
| cytochrome ubiquinol oxidase subunit i | AMR72_RS08885 | Not Available | Positive | 2024396 - 2025697 | 48505.1 |
| cytochrome d ubiquinol oxidase subunit ii | AMR72_RS08890 | Not Available | Positive | 2025703 - 2026728 | 38069.0 |
| hypothetical protein | AMR72_RS08895 | Not Available | Negative | 2026729 - 2027112 | 13952.5 |
| mfs transporter | AMR72_RS08900 | Not Available | Positive | 2027219 - 2028385 | 41645.1 |
| smp-30/gluconolactonase/lre family protein | AMR72_RS08905 | Not Available | Positive | 2028493 - 2029590 | 40870.8 |
| hypothetical protein | AMR72_RS08910 | Not Available | Positive | 2029659 - 2030057 | 15146.6 |
| type ix secretion system membrane protein porp/sprf | AMR72_RS08915 | Not Available | Negative | 2030271 - 2031209 | 35696.1 |
| t9ss type b sorting domain-containing protein | AMR72_RS08920 | Not Available | Negative | 2031285 - 2036501 | 182653.0 |
| sprb repeat-containing protein | AMR72_RS08925 | Not Available | Negative | 2037163 - 2039463 | 79642.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
