Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | AMR72_RS08730 | Not Available | Positive | 1991965 - 1993287 | 49527.0 |
| efflux rnd transporter periplasmic adaptor subunit | AMR72_RS08735 | Not Available | Positive | 1993293 - 1994354 | 37667.2 |
| efflux rnd transporter permease subunit | AMR72_RS08740 | Not Available | Positive | 1994401 - 1997568 | 115335.0 |
| tonb-dependent receptor | AMR72_RS08745 | Not Available | Positive | 1997857 - 2000388 | 92712.3 |
| pepsy domain-containing protein | AMR72_RS08750 | Not Available | Positive | 2000528 - 2001709 | 45529.3 |
| toxin-antitoxin system ywqk family antitoxin | AMR72_RS08755 | Not Available | Negative | 2001776 - 2002129 | 13089.4 |
| tlpa disulfide reductase family protein | AMR72_RS08760 | Not Available | Negative | 2002433 - 2003419 | 36558.9 |
| psbp-related protein | AMR72_RS08765 | Not Available | Positive | 2003592 - 2004167 | 22106.5 |
| aspartate--trna ligase | AMR72_RS08770 | Not Available | Positive | 2004238 - 2005992 | 65696.5 |
| hypothetical protein | AMR72_RS08775 | Not Available | Negative | 2006041 - 2006589 | 21730.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
