Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-loop atpase, sll1717 family | AMR72_RS08630 | Not Available | Positive | 1971422 - 1973782 | 91030.2 |
| lipocalin family protein | AMR72_RS08635 | Not Available | Positive | 1974038 - 1974457 | 15295.5 |
| giy-yig nuclease family protein | AMR72_RS08640 | Not Available | Positive | 1974461 - 1975114 | 24877.7 |
| hypothetical protein | AMR72_RS08645 | Not Available | Negative | 1975552 - 1976520 | 36875.4 |
| Trna-ser | Not Available | Not Available | Positive | 1977058 - 1977145 | Not Available |
| asparaginase | AMR72_RS08655 | Not Available | Negative | 1977194 - 1978222 | 37455.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AMR72_RS08660 | Not Available | Negative | 1978212 - 1979348 | 43874.8 |
| tatd family hydrolase | AMR72_RS08665 | Not Available | Negative | 1979417 - 1980184 | 29455.0 |
| retropepsin-like aspartic protease | AMR72_RS08670 | Not Available | Positive | 1980284 - 1980721 | 15958.4 |
| t9ss type a sorting domain-containing protein | AMR72_RS08675 | Not Available | Positive | 1980827 - 1981975 | 41775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
